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ACOT4 acyl-CoA thioesterase 4 [ Manis javanica (Malayan pangolin) ]

Gene ID: 108397199, updated on 14-Mar-2024

Summary

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Gene symbol
ACOT4
Gene description
acyl-CoA thioesterase 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Manis javanica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Pholidota; Manidae; Manis
Orthologs
human all
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Genomic context

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See ACOT4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
101 current YNU_ManJav_2.0 (GCF_014570535.1) Unplaced Scaffold NW_023435897.1 (7786038..7789666, complement)
100 previous assembly ManJav1.0 (GCF_001685135.1) Unplaced Scaffold NW_016533243.1 (104658..111224)

NW_023435897.1Genomic Context describing neighboring genes Neighboring gene dynein axonemal light chain 1 Neighboring gene uncharacterized LOC108397201 Neighboring gene acyl-CoA thioesterase 6 Neighboring gene acyl-coenzyme A thioesterase 1 Neighboring gene HEAT repeat containing 4 Neighboring gene ribosomal oxygenase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fatty acyl-CoA hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in acyl-CoA metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
peroxisomal succinyl-coenzyme A thioesterase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manis javanica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference YNU_ManJav_2.0 Primary Assembly

Genomic

  1. NW_023435897.1 Reference YNU_ManJav_2.0 Primary Assembly

    Range
    7786038..7789666 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017660496.2 → XP_017515985.1  peroxisomal succinyl-coenzyme A thioesterase isoform X1

  2. XM_036995624.1 → XP_036851519.1  peroxisomal succinyl-coenzyme A thioesterase isoform X2

    Conserved Domains (1) summary
    pfam04775
    Location:16 → 137
    Bile_Hydr_Trans; Acyl-CoA thioester hydrolase/BAAT N-terminal region
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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