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ACLY ATP citrate lyase [ Manis javanica (Malayan pangolin) ]

Gene ID: 108397138, updated on 14-Mar-2024

Summary

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Gene symbol
ACLY
Gene description
ATP citrate lyase
Gene type
protein coding
RefSeq status
MODEL
Organism
Manis javanica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Pholidota; Manidae; Manis
Orthologs
human mouse all
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Genomic context

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See ACLY in Genome Data Viewer
Location:
chromosome: Un
Exon count:
29
Annotation release Status Assembly Chr Location
101 current YNU_ManJav_2.0 (GCF_014570535.1) Unplaced Scaffold NW_023436039.1 (986571..1024985)
100 previous assembly ManJav1.0 (GCF_001685135.1) Unplaced Scaffold NW_016533180.1 (1714..40715)

NW_023436039.1Genomic Context describing neighboring genes Neighboring gene 2',3'-cyclic nucleotide 3' phosphodiesterase Neighboring gene outer dynein arm docking complex subunit 4 Neighboring gene kelch like family member 11 Neighboring gene kelch like family member 10

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP citrate synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in acetyl-CoA biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in citrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-citrate synthase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manis javanica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference YNU_ManJav_2.0 Primary Assembly

Genomic

  1. NW_023436039.1 Reference YNU_ManJav_2.0 Primary Assembly

    Range
    986571..1024985
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017660394.2 → XP_017515883.1  ATP-citrate synthase isoform X1

  2. XM_017660395.2 → XP_017515884.1  ATP-citrate synthase isoform X1

  3. XM_017660392.2 → XP_017515881.1  ATP-citrate synthase isoform X1

  4. XM_017660396.2 → XP_017515885.1  ATP-citrate synthase isoform X2

  5. XM_017660393.2 → XP_017515882.1  ATP-citrate synthase isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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