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B4GALT3 beta-1,4-galactosyltransferase 3 [ Manis javanica (Malayan pangolin) ]

Gene ID: 108394555, updated on 14-Mar-2024

Summary

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Gene symbol
B4GALT3
Gene description
beta-1,4-galactosyltransferase 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Manis javanica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Pholidota; Manidae; Manis
Orthologs
human mouse all
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Genomic context

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See B4GALT3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current YNU_ManJav_2.0 (GCF_014570535.1) Unplaced Scaffold NW_023436095.1 (6701787..6707346)
100 previous assembly ManJav1.0 (GCF_001685135.1) Unplaced Scaffold NW_016531253.1 (10425..15958)

NW_023436095.1Genomic Context describing neighboring genes Neighboring gene NADH:ubiquinone oxidoreductase core subunit S2 Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 4 Neighboring gene protoporphyrinogen oxidase Neighboring gene ubiquitin specific peptidase 21

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in galactosylceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manis javanica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference YNU_ManJav_2.0 Primary Assembly

Genomic

  1. NW_023436095.1 Reference YNU_ManJav_2.0 Primary Assembly

    Range
    6701787..6707346
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017656192.2 → XP_017511681.2  beta-1,4-galactosyltransferase 3 isoform X1

    Conserved Domains (1) summary
    cd00899
    Location:125 → 354
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  2. XM_017656194.2 → XP_017511683.2  beta-1,4-galactosyltransferase 3 isoform X1

    Conserved Domains (1) summary
    cd00899
    Location:125 → 354
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  3. XM_017656190.2 → XP_017511679.2  beta-1,4-galactosyltransferase 3 isoform X1

    Conserved Domains (1) summary
    cd00899
    Location:125 → 354
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  4. XM_017656195.2 → XP_017511684.2  beta-1,4-galactosyltransferase 3 isoform X2

    Conserved Domains (1) summary
    cd00899
    Location:125 → 344
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  5. XM_017656193.2 → XP_017511682.2  beta-1,4-galactosyltransferase 3 isoform X1

    Conserved Domains (1) summary
    cd00899
    Location:125 → 354
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  6. XM_037023901.1 → XP_036879796.1  beta-1,4-galactosyltransferase 3 isoform X1

    Conserved Domains (1) summary
    cd00899
    Location:125 → 354
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  7. XM_017656191.2 → XP_017511680.2  beta-1,4-galactosyltransferase 3 isoform X1

    Conserved Domains (1) summary
    cd00899
    Location:125 → 354
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
Nucleotide Protein
Heading Accession and Version

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