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B3GNT2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 [ Manis javanica (Malayan pangolin) ]

Gene ID: 108393417, updated on 14-Mar-2024

Summary

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Gene symbol
B3GNT2
Gene description
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Manis javanica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Pholidota; Manidae; Manis
Orthologs
human mouse all
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Genomic context

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See B3GNT2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
101 current YNU_ManJav_2.0 (GCF_014570535.1) Unplaced Scaffold NW_023436182.1 (2197142..2226537, complement)
100 previous assembly ManJav1.0 (GCF_001685135.1) Unplaced Scaffold NW_016530481.1 (142118..146301)

NW_023436182.1Genomic Context describing neighboring genes Neighboring gene EH domain binding protein 1 Neighboring gene U2 spliceosomal RNA Neighboring gene transmembrane protein 17 Neighboring gene COMM domain-containing protein 1 Neighboring gene COMM domain-containing protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manis javanica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference YNU_ManJav_2.0 Primary Assembly

Genomic

  1. NW_023436182.1 Reference YNU_ManJav_2.0 Primary Assembly

    Range
    2197142..2226537 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036996625.1 → XP_036852520.1  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2

    Conserved Domains (1) summary
    cl21608
    Location:156 → 345
    Galactosyl_T; Galactosyltransferase

  2. XM_036996624.1 → XP_036852519.1  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2

    Conserved Domains (1) summary
    cl21608
    Location:156 → 345
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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