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CLEC6A C-type lectin domain containing 6A [ Manis javanica (Malayan pangolin) ]

Gene ID: 108392221, updated on 14-Mar-2024

Summary

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Gene symbol
CLEC6A
Gene description
C-type lectin domain containing 6A
Gene type
protein coding
RefSeq status
MODEL
Organism
Manis javanica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Pholidota; Manidae; Manis
Orthologs
human all
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Genomic context

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See CLEC6A in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current YNU_ManJav_2.0 (GCF_014570535.1) Unplaced Scaffold NW_023435947.1 (1405987..1417716)
100 previous assembly ManJav1.0 (GCF_001685135.1) Unplaced Scaffold NW_016529772.1 (286131..297843)

NW_023435947.1Genomic Context describing neighboring genes Neighboring gene syncytin-1-like Neighboring gene C-type lectin domain family 4 member A-like Neighboring gene C-type lectin domain family 4 member D Neighboring gene C-type lectin domain family 4 member D-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in antifungal innate immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-type lectin domain family 6 member A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manis javanica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference YNU_ManJav_2.0 Primary Assembly

Genomic

  1. NW_023435947.1 Reference YNU_ManJav_2.0 Primary Assembly

    Range
    1405987..1417716
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017652317.2 → XP_017507806.1  C-type lectin domain family 6 member A isoform X2

  2. XM_017652316.2 → XP_017507805.1  C-type lectin domain family 6 member A isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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