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SOAT1 sterol O-acyltransferase 1 [ Manis javanica (Malayan pangolin) ]

Gene ID: 108391159, updated on 14-Mar-2024

Summary

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Gene symbol
SOAT1
Gene description
sterol O-acyltransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Manis javanica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Pholidota; Manidae; Manis
Orthologs
human mouse all
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Genomic context

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See SOAT1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
101 current YNU_ManJav_2.0 (GCF_014570535.1) Unplaced Scaffold NW_023436076.1 (751621..812457, complement)
100 previous assembly ManJav1.0 (GCF_001685135.1) Unplaced Scaffold NW_016529242.1 (17178..50636)

NW_023436076.1Genomic Context describing neighboring genes Neighboring gene deleted in azoospermia-like Neighboring gene axonemal dynein light chain domain-containing protein 1-like Neighboring gene ABL proto-oncogene 2, non-receptor tyrosine kinase Neighboring gene torsin family 3 member A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cholesterol O-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cholesterol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fatty-acyl-CoA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cholesterol efflux IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cholesterol homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cholesterol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sterol O-acyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manis javanica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference YNU_ManJav_2.0 Primary Assembly

Genomic

  1. NW_023436076.1 Reference YNU_ManJav_2.0 Primary Assembly

    Range
    751621..812457 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037022474.1 → XP_036878369.1  sterol O-acyltransferase 1 isoform X3

    Conserved Domains (1) summary
    pfam03062
    Location:127 → 476
    MBOAT; membrane-bound O-acyltransferase family

  2. XM_037022472.1 → XP_036878367.1  sterol O-acyltransferase 1 isoform X1

    Conserved Domains (1) summary
    pfam03062
    Location:171 → 520
    MBOAT; membrane-bound O-acyltransferase family

  3. XM_037022473.1 → XP_036878368.1  sterol O-acyltransferase 1 isoform X2

    Conserved Domains (1) summary
    pfam03062
    Location:171 → 520
    MBOAT; membrane-bound O-acyltransferase family
Nucleotide Protein
Heading Accession and Version

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