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PLA2G4D phospholipase A2 group IVD [ Manis javanica (Malayan pangolin) ]

Gene ID: 108385404, updated on 14-Mar-2024

Summary

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Gene symbol
PLA2G4D
Gene description
phospholipase A2 group IVD
Gene type
protein coding
RefSeq status
MODEL
Organism
Manis javanica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Pholidota; Manidae; Manis
Orthologs
human mouse all
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Genomic context

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See PLA2G4D in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
101 current YNU_ManJav_2.0 (GCF_014570535.1) Unplaced Scaffold NW_023436028.1 (1827984..1850152)
100 previous assembly ManJav1.0 (GCF_001685135.1) Unplaced Scaffold NW_016555279.1 (432649..454791, complement)

NW_023436028.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118972448 Neighboring gene uncharacterized LOC118972447 Neighboring gene phospholipase A2 group IVF Neighboring gene phospholipase A2 group IVE Neighboring gene uncharacterized LOC108385415 Neighboring gene uncharacterized LOC118972477

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipase A2 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycerophospholipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytosolic phospholipase A2 delta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manis javanica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference YNU_ManJav_2.0 Primary Assembly

Genomic

  1. NW_023436028.1 Reference YNU_ManJav_2.0 Primary Assembly

    Range
    1827984..1850152
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017642826.2 → XP_017498315.2  cytosolic phospholipase A2 delta

    Conserved Domains (3) summary
    cd04036
    Location:22 → 141
    C2_cPLA2; C2 domain present in cytosolic PhosphoLipase A2 (cPLA2)
    pfam18695
    Location:162 → 261
    cPLA2_C2; Cytosolic phospholipases A2 C2-domain
    cl11396
    Location:262 → 799
    Patatin_and_cPLA2; Patatins and Phospholipases
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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