U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CSPG5 chondroitin sulfate proteoglycan 5 [ Manis javanica (Malayan pangolin) ]

Gene ID: 108384802, updated on 14-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
CSPG5
Gene description
chondroitin sulfate proteoglycan 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Manis javanica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Pholidota; Manidae; Manis
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See CSPG5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current YNU_ManJav_2.0 (GCF_014570535.1) Unplaced Scaffold NW_023436146.1 (5497211..5509144, complement)
100 previous assembly ManJav1.0 (GCF_001685135.1) Unplaced Scaffold NW_016528348.1 (103367..116438)

NW_023436146.1Genomic Context describing neighboring genes Neighboring gene SREBF chaperone Neighboring gene uncharacterized LOC118967607 Neighboring gene elongator acetyltransferase complex subunit 6 Neighboring gene SWI/SNF related BAF chromatin remodeling complex subunit C1 Neighboring gene uncharacterized LOC118967593 Neighboring gene DExH-box helicase 30

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
chondroitin sulfate proteoglycan 5

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Manis javanica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference YNU_ManJav_2.0 Primary Assembly

Genomic

  1. NW_023436146.1 Reference YNU_ManJav_2.0 Primary Assembly

    Range
    5497211..5509144 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036994473.1 → XP_036850368.1  chondroitin sulfate proteoglycan 5

    Conserved Domains (2) summary
    pfam06566
    Location:159 → 202
    Chon_Sulph_att; Chondroitin sulphate attachment domain
    pfam06567
    Location:338 → 428
    Neural_ProG_Cyt; Neural chondroitin sulphate proteoglycan cytoplasmic domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.