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LOC108353938 alpha-N-acetylgalactosaminidase-like [ Rhagoletis zephyria (snowberry fruit fly) ]

Gene ID: 108353938, updated on 9-Nov-2023

Summary

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Gene symbol
LOC108353938
Gene description
alpha-N-acetylgalactosaminidase-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhagoletis zephyria
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Tephritoidea; Tephritidae; Rhagoletis
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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See LOC108353938 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Rhagoletis_zephyria_1.0 (GCF_001687245.1) Unplaced Scaffold NW_016189432.1 (1903..3228)

NW_016189432.1Genomic Context describing neighboring genes Neighboring gene alpha-N-acetylgalactosaminidase pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_016189432.1 Unplaced Scaffold Reference Rhagoletis_zephyria_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-galactosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycoside catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycosylceramide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-N-acetylgalactosaminidase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhagoletis zephyria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Rhagoletis_zephyria_1.0

Genomic

  1. NW_016189432.1 Reference Rhagoletis_zephyria_1.0

    Range
    1903..3228
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017605131.1 → XP_017460620.1  alpha-N-acetylgalactosaminidase-like

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases