U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC108347295 laccase-7 [ Vigna angularis (adzuki bean) ]

Gene ID: 108347295, updated on 23-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC108347295
Gene description
laccase-7
Locus tag
HKW66_Vig0201890
Gene type
protein coding
RefSeq status
MODEL
Organism
Vigna angularis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Vigna
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC108347295 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2022_12 current ASM1680809v1 (GCF_016808095.1) 9 NC_068978.1 (24080773..24083604, complement)
100 previous assembly Vigan1.1 (GCF_001190045.1) 11 NC_030647.1 (20391655..20394429)

Chromosome 9 - NC_068978.1Genomic Context describing neighboring genes Neighboring gene GDSL esterase/lipase At5g33370 Neighboring gene laccase-7 Neighboring gene uncharacterized LOC108347396 Neighboring gene uncharacterized LOC108347176

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables copper ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hydroquinone:oxygen oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lignin catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in apoplast IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
laccase-7
Names
Laccase-7 protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_016808095.1-RS_2023_1

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1680809v1 Primary Assembly

Genomic

  1. NC_068978.1 Reference ASM1680809v1 Primary Assembly

    Range
    24080773..24083604 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017586463.2 → XP_017441952.1  laccase-7

    UniProtKB/TrEMBL
    A0A0L9VU24, A0A0S3SWM8
    Conserved Domains (4) summary
    cd13849
    Location:25 → 141
    CuRO_1_LCC_plant; The first cupredoxin domain of plant laccases
    cd13875
    Location:157 → 303
    CuRO_2_LCC_plant; The second cupredoxin domain of the plant laccases
    cd13897
    Location:408 → 551
    CuRO_3_LCC_plant; The third cupredoxin domain of the plant laccases
    TIGR03389
    Location:20 → 568
    laccase; laccase, plant
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases