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LOC108345987 xyloglucan glycosyltransferase 4 [ Vigna angularis (adzuki bean) ]

Gene ID: 108345987, updated on 23-Nov-2023

Summary

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Gene symbol
LOC108345987
Gene description
xyloglucan glycosyltransferase 4
Locus tag
HKW66_Vig0255800
Gene type
protein coding
RefSeq status
MODEL
Organism
Vigna angularis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Vigna
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Genomic context

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See LOC108345987 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2022_12 current ASM1680809v1 (GCF_016808095.1) 8 NC_068977.1 (197001..200398, complement)
100 previous assembly Vigan1.1 (GCF_001190045.1) 10 NC_030646.1 (38626864..38630247)

Chromosome 8 - NC_068977.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108343949 Neighboring gene uncharacterized LOC108345058 Neighboring gene uncharacterized LOC108345148 Neighboring gene uncharacterized LOC108345521 Neighboring gene xyloglucan O-acetyltransferase 3-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
xyloglucan glycosyltransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016808095.1-RS_2023_1

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1680809v1 Primary Assembly

Genomic

  1. NC_068977.1 Reference ASM1680809v1 Primary Assembly

    Range
    197001..200398 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017584884.2 → XP_017440373.1  xyloglucan glycosyltransferase 4

    UniProtKB/TrEMBL
    A0A0L9VP30, A0A0S3T743
    Conserved Domains (1) summary
    cl11394
    Location:202 → 438
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  2. XM_017584883.2 → XP_017440372.1  xyloglucan glycosyltransferase 4

    UniProtKB/TrEMBL
    A0A0L9VP30, A0A0S3T743
    Conserved Domains (1) summary
    cl11394
    Location:202 → 438
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

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