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LOC108343590 glucan endo-1,3-beta-glucosidase 1 [ Vigna angularis (adzuki bean) ]

Gene ID: 108343590, updated on 23-Nov-2023

Summary

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Gene symbol
LOC108343590
Gene description
glucan endo-1,3-beta-glucosidase 1
Locus tag
HKW66_Vig0069170
Gene type
protein coding
RefSeq status
MODEL
Organism
Vigna angularis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Vigna
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Genomic context

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See LOC108343590 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2022_12 current ASM1680809v1 (GCF_016808095.1) 6 NC_068975.1 (31711609..31714780, complement)
100 previous assembly Vigan1.1 (GCF_001190045.1) 9 NC_030645.1 (25714356..25717291, complement)

Chromosome 6 - NC_068975.1Genomic Context describing neighboring genes Neighboring gene probable transcription factor KAN4 Neighboring gene transfer RNA phenylalanine (anticodon GAA) Neighboring gene uncharacterized LOC108341245 Neighboring gene 5'-adenylylsulfate reductase 3, chloroplastic

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucan endo-1,3-beta-glucosidase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016808095.1-RS_2023_1

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1680809v1 Primary Assembly

Genomic

  1. NC_068975.1 Reference ASM1680809v1 Primary Assembly

    Range
    31711609..31714780 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017581954.2 → XP_017437443.1  glucan endo-1,3-beta-glucosidase 1

    UniProtKB/TrEMBL
    A0A0L9VEQ2, A0A0S3S3U5
    Conserved Domains (2) summary
    smart00768
    Location:372 → 457
    X8; Possibly involved in carbohydrate binding
    cl23725
    Location:36 → 353
    Glyco_hydro; Glycosyl hydrolases
Nucleotide Protein
Heading Accession and Version

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