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LOC108343376 glycoprotein 3-alpha-L-fucosyltransferase A [ Vigna angularis (adzuki bean) ]

Gene ID: 108343376, updated on 23-Nov-2023

Summary

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Gene symbol
LOC108343376
Gene description
glycoprotein 3-alpha-L-fucosyltransferase A
Locus tag
HKW66_Vig0040010
Gene type
protein coding
RefSeq status
MODEL
Organism
Vigna angularis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Vigna
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Genomic context

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See LOC108343376 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2022_12 current ASM1680809v1 (GCF_016808095.1) 1 NC_068970.1 (27642415..27649037, complement)
100 previous assembly Vigan1.1 (GCF_001190045.1) 9 NC_030645.1 (9636917..9643653)

Chromosome 1 - NC_068970.1Genomic Context describing neighboring genes Neighboring gene abscisic acid 8'-hydroxylase 4 Neighboring gene ferredoxin--nitrite reductase, chloroplastic Neighboring gene cold-regulated protein 28 Neighboring gene uncharacterized LOC128194094

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycoprotein 3-alpha-L-fucosyltransferase A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016808095.1-RS_2023_1

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1680809v1 Primary Assembly

Genomic

  1. NC_068970.1 Reference ASM1680809v1 Primary Assembly

    Range
    27642415..27649037 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017581624.2 → XP_017437113.1  glycoprotein 3-alpha-L-fucosyltransferase A isoform X2

    UniProtKB/TrEMBL
    A0A0L9VAP5

  2. XM_017581622.2 → XP_017437111.1  glycoprotein 3-alpha-L-fucosyltransferase A isoform X1

    UniProtKB/TrEMBL
    A0A0L9VAP5, A0A0S3R363, A0A8T0LAN9
    Conserved Domains (1) summary
    pfam00852
    Location:221 → 385
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term

  3. XM_017581626.2 → XP_017437115.1  glycoprotein 3-alpha-L-fucosyltransferase A isoform X4

  4. XM_017581625.2 → XP_017437114.1  glycoprotein 3-alpha-L-fucosyltransferase A isoform X3

Nucleotide Protein
Heading Accession and Version

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