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LOC108343258 probable galacturonosyltransferase 15 [ Vigna angularis (adzuki bean) ]

Gene ID: 108343258, updated on 23-Nov-2023

Summary

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Gene symbol
LOC108343258
Gene description
probable galacturonosyltransferase 15
Locus tag
HKW66_Vig0181660
Gene type
protein coding
RefSeq status
MODEL
Organism
Vigna angularis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Vigna
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Genomic context

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See LOC108343258 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2022_12 current ASM1680809v1 (GCF_016808095.1) 6 NC_068975.1 (4530604..4537765, complement)
100 previous assembly Vigan1.1 (GCF_001190045.1) 9 NC_030645.1 (12375182..12382210)

Chromosome 6 - NC_068975.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108341416 Neighboring gene heat stress transcription factor A-5 Neighboring gene trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 Neighboring gene uncharacterized LOC108341414

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 15
Names
galacturonosyltransferase 15

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016808095.1-RS_2023_1

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1680809v1 Primary Assembly

Genomic

  1. NC_068975.1 Reference ASM1680809v1 Primary Assembly

    Range
    4530604..4537765 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017581430.2 → XP_017436919.1  probable galacturonosyltransferase 15

    UniProtKB/TrEMBL
    A0A0L9VAY3, A0A0S3S806, A0A8T0K4F0
    Conserved Domains (1) summary
    PLN02867
    Location:1 → 526
    PLN02867; Probable galacturonosyltransferase
Nucleotide Protein
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