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LOC108341635 putative pectate lyase 2 [ Vigna angularis (adzuki bean) ]

Gene ID: 108341635, updated on 23-Nov-2023

Summary

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Gene symbol
LOC108341635
Gene description
putative pectate lyase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Vigna angularis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Vigna
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Genomic context

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See LOC108341635 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2022_12 current ASM1680809v1 (GCF_016808095.1) 6 NC_068975.1 (31585288..31586876)
100 previous assembly Vigan1.1 (GCF_001190045.1) 9 NC_030645.1 (25603887..25605595)

Chromosome 6 - NC_068975.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108342534 Neighboring gene pre-mRNA cleavage factor Im 25 kDa subunit 2 Neighboring gene putative pectate lyase 2 Neighboring gene uncharacterized LOC108342119 Neighboring gene PKS-NRPS hybrid synthetase cheA-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pectate lyase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative pectate lyase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016808095.1-RS_2023_1

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1680809v1 Primary Assembly

Genomic

  1. NC_068975.1 Reference ASM1680809v1 Primary Assembly

    Range
    31585288..31586876
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052879379.1 → XP_052735339.1  putative pectate lyase 2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases