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LOC108340482 diacylglycerol kinase 1 [ Vigna angularis (adzuki bean) ]

Gene ID: 108340482, updated on 18-Sep-2024

Summary

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Gene symbol
LOC108340482
Gene description
diacylglycerol kinase 1
Locus tag
HKW66_Vig0229680
Gene type
protein coding
RefSeq status
MODEL
Organism
Vigna angularis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Vigna
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Genomic context

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See LOC108340482 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2022_12 current ASM1680809v1 (GCF_016808095.1) 5 NC_068974.1 (6244094..6251159, complement)
100 previous assembly Vigan1.1 (GCF_001190045.1) 8 NC_030644.1 (3132279..3139318)

Chromosome 5 - NC_068974.1Genomic Context describing neighboring genes Neighboring gene pentatricopeptide repeat-containing protein At3g24000, mitochondrial Neighboring gene chlorophyll a-b binding protein 13, chloroplastic Neighboring gene ubiquitin carboxyl-terminal hydrolase 14 Neighboring gene G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP-dependent diacylglycerol kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
diacylglycerol kinase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016808095.1-RS_2023_1

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1680809v1 Primary Assembly

Genomic

  1. NC_068974.1 Reference ASM1680809v1 Primary Assembly

    Range
    6244094..6251159 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017577897.2 → XP_017433386.1  diacylglycerol kinase 1 isoform X3

    UniProtKB/TrEMBL
    A0A0L9V386
    Conserved Domains (2) summary
    smart00046
    Location:38 → 162
    DAGKc; Diacylglycerol kinase catalytic domain (presumed)
    cl02440
    Location:231 → 401
    DAGK_acc; Diacylglycerol kinase accessory domain

  2. XM_017577899.2 → XP_017433388.1  diacylglycerol kinase 1 isoform X3

    UniProtKB/TrEMBL
    A0A0L9V386
    Conserved Domains (2) summary
    smart00046
    Location:38 → 162
    DAGKc; Diacylglycerol kinase catalytic domain (presumed)
    cl02440
    Location:231 → 401
    DAGK_acc; Diacylglycerol kinase accessory domain

  3. XM_052878522.1 → XP_052734482.1  diacylglycerol kinase 1 isoform X1

    UniProtKB/TrEMBL
    A0A0S3S9N1

  4. XM_017577896.2 → XP_017433385.1  diacylglycerol kinase 1 isoform X2

Nucleotide Protein
Heading Accession and Version

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