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LOC108339802 endoglucanase 4 [ Vigna angularis (adzuki bean) ]

Gene ID: 108339802, updated on 23-Nov-2023

Summary

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Gene symbol
LOC108339802
Gene description
endoglucanase 4
Locus tag
HKW66_Vig0135020
Gene type
protein coding
RefSeq status
MODEL
Organism
Vigna angularis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Vigna
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Genomic context

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See LOC108339802 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2022_12 current ASM1680809v1 (GCF_016808095.1) 5 NC_068974.1 (40674810..40676905)
100 previous assembly Vigan1.1 (GCF_001190045.1) 8 NC_030644.1 (30438395..30440490)

Chromosome 5 - NC_068974.1Genomic Context describing neighboring genes Neighboring gene two-component response regulator ARR14-like Neighboring gene endoglucanase 1-like Neighboring gene 21 kDa protein Neighboring gene pectinesterase inhibitor 10

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
endoglucanase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016808095.1-RS_2023_1

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1680809v1 Primary Assembly

Genomic

  1. NC_068974.1 Reference ASM1680809v1 Primary Assembly

    Range
    40674810..40676905
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017577014.1 → XP_017432503.1  endoglucanase 4

    UniProtKB/TrEMBL
    A0A0L9V9G8, A0A0S3SET8, A0A8T0KH06
    Conserved Domains (1) summary
    cl02959
    Location:27 → 482
    Glyco_hydro_9; Glycosyl hydrolase family 9
Nucleotide Protein
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