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LOC108337984 hydroxyproline O-arabinosyltransferase 1 [ Vigna angularis (adzuki bean) ]

Gene ID: 108337984, updated on 23-Nov-2023

Summary

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Gene symbol
LOC108337984
Gene description
hydroxyproline O-arabinosyltransferase 1
Locus tag
HKW66_Vig0224960
Gene type
protein coding
RefSeq status
MODEL
Organism
Vigna angularis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Vigna
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Genomic context

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See LOC108337984 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2022_12 current ASM1680809v1 (GCF_016808095.1) 7 NC_068976.1 (11659497..11664213, complement)
100 previous assembly Vigan1.1 (GCF_001190045.1) 7 NC_030643.1 (34039934..34044629, complement)

Chromosome 7 - NC_068976.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108337675 Neighboring gene uncharacterized LOC108337982 Neighboring gene uncharacterized LOC108337903 Neighboring gene uncharacterized LOC108336975

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hydroxyproline O-arabinosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016808095.1-RS_2023_1

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1680809v1 Primary Assembly

Genomic

  1. NC_068976.1 Reference ASM1680809v1 Primary Assembly

    Range
    11659497..11664213 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017574584.2 → XP_017430073.1  hydroxyproline O-arabinosyltransferase 1

    UniProtKB/TrEMBL
    A0A0L9V1H9, A0A0S3RP66
Nucleotide Protein
Heading Accession and Version

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