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LOC108335993 probable glycosyltransferase At3g42180 [ Vigna angularis (adzuki bean) ]

Gene ID: 108335993, updated on 23-Nov-2023

Summary

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Gene symbol
LOC108335993
Gene description
probable glycosyltransferase At3g42180
Locus tag
HKW66_Vig0028060
Gene type
protein coding
RefSeq status
MODEL
Organism
Vigna angularis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Vigna
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Genomic context

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See LOC108335993 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2022_12 current ASM1680809v1 (GCF_016808095.1) 1 NC_068970.1 (10924011..10926267, complement)
100 previous assembly Vigan1.1 (GCF_001190045.1) 1 NC_030637.1 (33748733..33751022)

Chromosome 1 - NC_068970.1Genomic Context describing neighboring genes Neighboring gene xylogalacturonan beta-1,3-xylosyltransferase Neighboring gene xylogalacturonan beta-1,3-xylosyltransferase Neighboring gene heptahelical transmembrane protein 1 Neighboring gene probable sucrose-phosphate synthase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable glycosyltransferase At3g42180
Names
glycosyltransferase protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016808095.1-RS_2023_1

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1680809v1 Primary Assembly

Genomic

  1. NC_068970.1 Reference ASM1680809v1 Primary Assembly

    Range
    10924011..10926267 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017572262.2 → XP_017427751.2  probable glycosyltransferase At3g42180 isoform X2

    UniProtKB/TrEMBL
    A0A0L9TRE9

  2. XM_052871593.1 → XP_052727553.1  probable glycosyltransferase At3g42180 isoform X1

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases