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LOC108334051 UDP-glycosyltransferase TURAN [ Vigna angularis (adzuki bean) ]

Gene ID: 108334051, updated on 23-Nov-2023

Summary

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Gene symbol
LOC108334051
Gene description
UDP-glycosyltransferase TURAN
Gene type
protein coding
RefSeq status
MODEL
Organism
Vigna angularis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Vigna
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Genomic context

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See LOC108334051 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2022_12 current ASM1680809v1 (GCF_016808095.1) 11 NC_068980.1 (24826552..24832181, complement)
100 previous assembly Vigan1.1 (GCF_001190045.1) 5 NC_030641.1 (2661192..2666761)

Chromosome 11 - NC_068980.1Genomic Context describing neighboring genes Neighboring gene elongation factor 2 Neighboring gene elongation factor 2 Neighboring gene DNA polymerase zeta processivity subunit Neighboring gene probable BOI-related E3 ubiquitin-protein ligase 3 Neighboring gene protein Iojap, chloroplastic

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-glycosyltransferase TURAN

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016808095.1-RS_2023_1

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1680809v1 Primary Assembly

Genomic

  1. NC_068980.1 Reference ASM1680809v1 Primary Assembly

    Range
    24826552..24832181 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017569660.2 → XP_017425149.1  UDP-glycosyltransferase TURAN isoform X2

  2. XM_017569659.2 → XP_017425148.1  UDP-glycosyltransferase TURAN isoform X1

    UniProtKB/TrEMBL
    A0A0L9UI99, A0A0S3SKB4
    Conserved Domains (2) summary
    cd03816
    Location:13 → 476
    GT1_ALG1_like; This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and ...
    PLN02275
    Location:11 → 438
    PLN02275; transferase, transferring glycosyl groups
Nucleotide Protein
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