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LOC108332102 heparanase-like protein 3 [ Vigna angularis (adzuki bean) ]

Gene ID: 108332102, updated on 23-Nov-2023

Summary

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Gene symbol
LOC108332102
Gene description
heparanase-like protein 3
Locus tag
HKW66_Vig0087060
Gene type
protein coding
RefSeq status
MODEL
Organism
Vigna angularis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Vigna
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Genomic context

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See LOC108332102 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2022_12 current ASM1680809v1 (GCF_016808095.1) 4 NC_068973.1 (5905223..5909360, complement)
100 previous assembly Vigan1.1 (GCF_001190045.1) 4 NC_030640.1 (3264488..3268626, complement)

Chromosome 4 - NC_068973.1Genomic Context describing neighboring genes Neighboring gene CBL-interacting serine/threonine-protein kinase 23 Neighboring gene putative ALA-interacting subunit 2 Neighboring gene uncharacterized LOC128196161 Neighboring gene protein PHOX1 Neighboring gene protein OS-9 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-glucuronidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plant-type cell wall IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparanase-like protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016808095.1-RS_2023_1

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1680809v1 Primary Assembly

Genomic

  1. NC_068973.1 Reference ASM1680809v1 Primary Assembly

    Range
    5905223..5909360 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017567217.2 → XP_017422706.1  heparanase-like protein 3

    UniProtKB/TrEMBL
    A0A0L9UBZ5, A0A0S3RGX4
    Conserved Domains (1) summary
    pfam03662
    Location:36 → 351
    Glyco_hydro_79n; Glycosyl hydrolase family 79, N-terminal domain
Nucleotide Protein
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