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LOC108331045 diacylglycerol kinase 4 [ Vigna angularis (adzuki bean) ]

Gene ID: 108331045, updated on 18-Sep-2024

Summary

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Gene symbol
LOC108331045
Gene description
diacylglycerol kinase 4
Locus tag
HKW66_Vig0086480
Gene type
protein coding
RefSeq status
MODEL
Organism
Vigna angularis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Vigna
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Genomic context

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See LOC108331045 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2022_12 current ASM1680809v1 (GCF_016808095.1) 4 NC_068973.1 (6649595..6669965)
100 previous assembly Vigan1.1 (GCF_001190045.1) 4 NC_030640.1 (2651807..2671915)

Chromosome 4 - NC_068973.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108331093 Neighboring gene pentatricopeptide repeat-containing protein At1g02060, chloroplastic Neighboring gene uncharacterized LOC108330069 Neighboring gene zinc finger BED domain-containing protein DAYSLEEPER

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP-dependent diacylglycerol kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
diacylglycerol kinase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016808095.1-RS_2023_1

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1680809v1 Primary Assembly

Genomic

  1. NC_068973.1 Reference ASM1680809v1 Primary Assembly

    Range
    6649595..6669965
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017565660.2 → XP_017421149.1  diacylglycerol kinase 4

    UniProtKB/TrEMBL
    A0A0L9UBY1, A0A0S3RGT2
    Conserved Domains (2) summary
    smart00046
    Location:77 → 193
    DAGKc; Diacylglycerol kinase catalytic domain (presumed)
    pfam00609
    Location:267 → 444
    DAGK_acc; Diacylglycerol kinase accessory domain
Nucleotide Protein
Heading Accession and Version

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