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LOC108322249 O-fucosyltransferase 36 [ Vigna angularis (adzuki bean) ]

Gene ID: 108322249, updated on 23-Nov-2023

Summary

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Gene symbol
LOC108322249
Gene description
O-fucosyltransferase 36
Locus tag
HKW66_Vig0091830
Gene type
protein coding
RefSeq status
MODEL
Organism
Vigna angularis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Vigna
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Genomic context

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See LOC108322249 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2022_12 current ASM1680809v1 (GCF_016808095.1) 4 NC_068973.1 (282022..284210)
100 previous assembly Vigan1.1 (GCF_001190045.1) Unplaced Scaffold NW_016115088.1 (264741..267007)

Chromosome 4 - NC_068973.1Genomic Context describing neighboring genes Neighboring gene RING-H2 finger protein ATL60 Neighboring gene uncharacterized LOC108322320 Neighboring gene protein STRUBBELIG-RECEPTOR FAMILY 7 Neighboring gene ATPase 10, plasma membrane-type

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptide-O-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
O-fucosyltransferase 36

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016808095.1-RS_2023_1

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1680809v1 Primary Assembly

Genomic

  1. NC_068973.1 Reference ASM1680809v1 Primary Assembly

    Range
    282022..284210
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017554272.2 → XP_017409761.1  O-fucosyltransferase 36

    UniProtKB/TrEMBL
    A0A0L9TFA6, A0A0S3RIB3
    Conserved Domains (1) summary
    cd11296
    Location:339 → 499
    O-FucT_like; GDP-fucose protein O-fucosyltransferase and related proteins
Nucleotide Protein
Heading Accession and Version

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