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LOC108321568 mannosyltransferase APTG1 [ Vigna angularis (adzuki bean) ]

Gene ID: 108321568, updated on 10-Oct-2024

Summary

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Gene symbol
LOC108321568
Gene description
mannosyltransferase APTG1
Locus tag
HKW66_Vig0024800
Gene type
protein coding
RefSeq status
MODEL
Organism
Vigna angularis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Vigna
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Genomic context

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See LOC108321568 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2022_12 current ASM1680809v1 (GCF_016808095.1) 1 NC_068970.1 (7108743..7112601, complement)
100 previous assembly Vigan1.1 (GCF_001190045.1) Unplaced Scaffold NW_016115047.1 (200342..204066)

Chromosome 1 - NC_068970.1Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase XBAT32 Neighboring gene uncharacterized LOC108321570 Neighboring gene PKS-NRPS hybrid synthetase cheA-like Neighboring gene VAN3-binding protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mannosyltransferase APTG1
Names
GPI mannosyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016808095.1-RS_2023_1

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1680809v1 Primary Assembly

Genomic

  1. NC_068970.1 Reference ASM1680809v1 Primary Assembly

    Range
    7108743..7112601 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052879950.1 → XP_052735910.1  mannosyltransferase APTG1 isoform X3

  2. XM_017553357.2 → XP_017408846.1  mannosyltransferase APTG1 isoform X1

    UniProtKB/TrEMBL
    A0A0L9TCP9, A0A0S3R8B6
    Conserved Domains (1) summary
    cl21590
    Location:1 → 534
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  3. XM_017553358.2 → XP_017408847.1  mannosyltransferase APTG1 isoform X2

    UniProtKB/TrEMBL
    A0A0L9TCP9, A0A8T0LA10
    Conserved Domains (1) summary
    cl21590
    Location:1 → 533
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
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