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LOC108321567 probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11 [ Vigna angularis (adzuki bean) ]

Gene ID: 108321567, updated on 23-Nov-2023

Summary

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Gene symbol
LOC108321567
Gene description
probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11
Locus tag
HKW66_Vig0024730
Gene type
protein coding
RefSeq status
MODEL
Organism
Vigna angularis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Vigna
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Genomic context

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See LOC108321567 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2022_12 current ASM1680809v1 (GCF_016808095.1) 1 NC_068970.1 (7023622..7026971, complement)
100 previous assembly Vigan1.1 (GCF_001190045.1) Unplaced Scaffold NW_016115047.1 (284829..288369)

Chromosome 1 - NC_068970.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108321553 Neighboring gene protein SUPPRESSOR OF MAX2 1 Neighboring gene uncharacterized LOC108321555 Neighboring gene uncharacterized LOC108321558

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in trehalose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in trehalose metabolism in response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11
Names
alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016808095.1-RS_2023_1

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1680809v1 Primary Assembly

Genomic

  1. NC_068970.1 Reference ASM1680809v1 Primary Assembly

    Range
    7023622..7026971 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017553356.2 → XP_017408845.1  probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11

    UniProtKB/TrEMBL
    A0A0L9TDC2, A0A0S3R890
    Conserved Domains (1) summary
    PLN02205
    Location:1 → 840
    PLN02205; alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Nucleotide Protein
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