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LOC108320583 probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase [ Vigna angularis (adzuki bean) ]

Gene ID: 108320583, updated on 6-Jun-2024

Summary

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Gene symbol
LOC108320583
Gene description
probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase
Locus tag
HKW66_Vig0166890
Gene type
protein coding
RefSeq status
MODEL
Organism
Vigna angularis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Vigna
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Genomic context

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See LOC108320583 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2022_12 current ASM1680809v1 (GCF_016808095.1) 9 NC_068978.1 (2048462..2056445)
100 previous assembly Vigan1.1 (GCF_001190045.1) Unplaced Scaffold NW_016114975.1 (2063118..2071239)

Chromosome 9 - NC_068978.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108320456 Neighboring gene uncharacterized LOC108320584 Neighboring gene ABC transporter C family member 8-like Neighboring gene pectinesterase inhibitor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in oligosaccharide-lipid intermediate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase
Names
dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016808095.1-RS_2023_1

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1680809v1 Primary Assembly

Genomic

  1. NC_068978.1 Reference ASM1680809v1 Primary Assembly

    Range
    2048462..2056445
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017552032.2 → XP_017407521.1  probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A0L9TVW0, A0A0S3SSX9, A0A0S3T001
    Conserved Domains (1) summary
    pfam03155
    Location:28 → 529
    Alg6_Alg8; ALG6, ALG8 glycosyltransferase family

  2. XM_017552033.2 → XP_017407522.1  probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A0L9TVW0, A0A0S3SSX9, A0A0S3T001
    Conserved Domains (1) summary
    pfam03155
    Location:28 → 529
    Alg6_Alg8; ALG6, ALG8 glycosyltransferase family

  3. XM_052868724.1 → XP_052724684.1  probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A0L9TVW0, A0A0S3SSX9, A0A0S3T001

  4. XM_017552034.2 → XP_017407523.1  probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A0L9TVW0, A0A0S3SSX9

  5. XM_017552031.2 → XP_017407520.1  probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A0L9TVW0, A0A0S3SSX9, A0A0S3T001
    Conserved Domains (1) summary
    pfam03155
    Location:28 → 529
    Alg6_Alg8; ALG6, ALG8 glycosyltransferase family
Nucleotide Protein
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