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CHST3 carbohydrate sulfotransferase 3 [ Cebus imitator (Panamanian white-faced capuchin) ]

Gene ID: 108318080, updated on 14-Mar-2024

Summary

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Gene symbol
CHST3
Gene description
carbohydrate sulfotransferase 3
See related
Ensembl:ENSCCAG00000024311
Gene type
protein coding
RefSeq status
MODEL
Organism
Cebus imitator
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Cebinae; Cebus
Orthologs
human mouse all
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Genomic context

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See CHST3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
101 current Cebus_imitator-1.0 (GCF_001604975.1) Unplaced Scaffold NW_016107530.1 (349445..399171, complement)

NW_016107530.1Genomic Context describing neighboring genes Neighboring gene SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 Neighboring gene uncharacterized LOC108318081 Neighboring gene U6 spliceosomal RNA Neighboring gene U7 small nuclear RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_016107530 Unplaced Scaffold Reference Cebus_imitator-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chondroitin 6-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cebus imitator Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cebus_imitator-1.0

Genomic

  1. NW_016107530.1 Reference Cebus_imitator-1.0

    Range
    349445..399171 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017548831.2 → XP_017404320.1  carbohydrate sulfotransferase 3

    UniProtKB/TrEMBL
    A0A2K5QAV3
    Related
    ENSCCAP00000013027.1, ENSCCAT00000030454.1
    Conserved Domains (1) summary
    pfam00685
    Location:262 → 447
    Sulfotransfer_1; Sulfotransferase domain

  2. XM_037745822.1 → XP_037601750.1  carbohydrate sulfotransferase 3

    UniProtKB/TrEMBL
    A0A2K5QAV3
    Conserved Domains (1) summary
    pfam00685
    Location:262 → 447
    Sulfotransfer_1; Sulfotransferase domain

  3. XM_037745821.1 → XP_037601749.1  carbohydrate sulfotransferase 3

    UniProtKB/TrEMBL
    A0A2K5QAV3
    Conserved Domains (1) summary
    pfam00685
    Location:262 → 447
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
Heading Accession and Version

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