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COG5 component of oligomeric golgi complex 5 [ Cebus imitator (Panamanian white-faced capuchin) ]

Gene ID: 108316801, updated on 14-Mar-2024

Summary

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Gene symbol
COG5
Gene description
component of oligomeric golgi complex 5
See related
Ensembl:ENSCCAG00000021701
Gene type
protein coding
RefSeq status
MODEL
Organism
Cebus imitator
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Cebinae; Cebus
Orthologs
human mouse all
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Genomic context

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See COG5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
23
Annotation release Status Assembly Chr Location
101 current Cebus_imitator-1.0 (GCF_001604975.1) Unplaced Scaffold NW_016107507.1 (314062..682138, complement)

NW_016107507.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119473884 Neighboring gene U1 spliceosomal RNA Neighboring gene protein kinase cAMP-dependent type II regulatory subunit beta Neighboring gene HMG-box transcription factor 1 Neighboring gene G protein-coupled receptor 22 Neighboring gene claudin domain-containing protein 1-like Neighboring gene small nucleolar RNA U109 Neighboring gene barrier-to-autointegration factor-like Neighboring gene dihydrouridine synthase 4 like Neighboring gene B cell receptor associated protein 29

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_016107507 Unplaced Scaffold Reference Cebus_imitator-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Golgi transport complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
conserved oligomeric Golgi complex subunit 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cebus imitator Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cebus_imitator-1.0

Genomic

  1. NW_016107507.1 Reference Cebus_imitator-1.0

    Range
    314062..682138 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017546917.2 → XP_017402406.1  conserved oligomeric Golgi complex subunit 5 isoform X1

    UniProtKB/TrEMBL
    A0A2K5PWE1
    Related
    ENSCCAP00000007965.1, ENSCCAT00000025341.1

  2. XM_037745106.1 → XP_037601034.1  conserved oligomeric Golgi complex subunit 5 isoform X2

    UniProtKB/TrEMBL
    A0A2K5PWB9
    Conserved Domains (1) summary
    pfam10392
    Location:35 → 158
    COG5; Golgi transport complex subunit 5

  3. XM_017546916.2 → XP_017402405.1  conserved oligomeric Golgi complex subunit 5 isoform X1

    UniProtKB/TrEMBL
    A0A2K5PWE1
    Related
    ENSCCAP00000007959.1, ENSCCAT00000025335.1
Nucleotide Protein
Heading Accession and Version

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