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ATXN2 ataxin 2 [ Cebus imitator (Panamanian white-faced capuchin) ]

Gene ID: 108313775, updated on 14-Mar-2024

Summary

Gene symbol
ATXN2
Gene description
ataxin 2
See related
Ensembl:ENSCCAG00000026267
Gene type
protein coding
RefSeq status
MODEL
Organism
Cebus imitator
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Cebinae; Cebus
Orthologs
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Genomic context

See ATXN2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
29
Annotation release Status Assembly Chr Location
101 current Cebus_imitator-1.0 (GCF_001604975.1) Unplaced Scaffold NW_016107323.1 (8460219..8613872, complement)

NW_016107323.1Genomic Context describing neighboring genes Neighboring gene PH domain containing endocytic trafficking adaptor 1 Neighboring gene SH2B adaptor protein 3 Neighboring gene 40S ribosomal protein S23-like Neighboring gene PEST proteolytic signal-containing nuclear protein-like Neighboring gene BRCA1 associated protein Neighboring gene acyl-CoA dehydrogenase family member 10

Genomic regions, transcripts, and products

Genomic Sequence:
NW_016107323 Unplaced Scaffold Reference Cebus_imitator-1.0

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in stress granule assembly IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasmic stress granule IEA
Inferred from Electronic Annotation
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cebus imitator Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cebus_imitator-1.0

Genomic

  1. NW_016107323.1 Reference Cebus_imitator-1.0

    Range
    8460219..8613872 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017542443.2XP_017397932.1  ataxin-2 isoform X18

    UniProtKB/TrEMBL
    A0A2K5QMQ9
  2. XM_017542448.2XP_017397937.1  ataxin-2 isoform X19

    UniProtKB/TrEMBL
    A0A2K5QMQ9
  3. XM_017542399.2XP_017397888.1  ataxin-2 isoform X12

    UniProtKB/TrEMBL
    A0A2K5QMQ9
    Related
    ENSCCAP00000017173.1, ENSCCAT00000034632.1
  4. XM_017542363.2XP_017397852.1  ataxin-2 isoform X7

    UniProtKB/TrEMBL
    A0A2K5QMQ9
  5. XM_017542330.2XP_017397819.1  ataxin-2 isoform X3

    UniProtKB/TrEMBL
    A0A2K5QMQ9
  6. XM_017542461.2XP_017397950.1  ataxin-2 isoform X21

    UniProtKB/TrEMBL
    A0A2K5QMQ9
  7. XM_017542347.2XP_017397836.1  ataxin-2 isoform X5

    UniProtKB/TrEMBL
    A0A2K5QMQ9
  8. XM_017542403.2XP_017397892.1  ataxin-2 isoform X13

    UniProtKB/TrEMBL
    A0A2K5QMQ9
  9. XM_017542353.2XP_017397842.1  ataxin-2 isoform X6

    UniProtKB/TrEMBL
    A0A2K5QMQ9
  10. XM_017542374.2XP_017397863.1  ataxin-2 isoform X9

    UniProtKB/TrEMBL
    A0A2K5QMQ9
  11. XM_017542326.2XP_017397815.1  ataxin-2 isoform X2

    UniProtKB/TrEMBL
    A0A2K5QMQ9
  12. XM_017542390.2XP_017397879.1  ataxin-2 isoform X11

    UniProtKB/TrEMBL
    A0A2K5QMQ9
  13. XM_017542337.2XP_017397826.1  ataxin-2 isoform X4

    UniProtKB/TrEMBL
    A0A2K5QMQ9
  14. XM_017542454.2XP_017397943.1  ataxin-2 isoform X20

    UniProtKB/TrEMBL
    A0A2K5QMQ9
  15. XM_017542413.2XP_017397902.1  ataxin-2 isoform X14

    UniProtKB/TrEMBL
    A0A2K5QMQ9
  16. XM_017542365.2XP_017397854.1  ataxin-2 isoform X8

    UniProtKB/TrEMBL
    A0A2K5QMQ9
  17. XM_017542430.2XP_017397919.1  ataxin-2 isoform X17

    UniProtKB/TrEMBL
    A0A2K5QMQ9
  18. XM_017542384.2XP_017397873.1  ataxin-2 isoform X10

    UniProtKB/TrEMBL
    A0A2K5QMQ9
  19. XM_017542319.2XP_017397808.1  ataxin-2 isoform X1

    UniProtKB/TrEMBL
    A0A2K5QMQ9
  20. XM_017542424.2XP_017397913.1  ataxin-2 isoform X16

    UniProtKB/TrEMBL
    A0A2K5QMP6, A0A2K5QMQ9
    Related
    ENSCCAP00000017163.1, ENSCCAT00000034622.1
  21. XM_037743523.1XP_037599451.1  ataxin-2 isoform X15

    UniProtKB/TrEMBL
    A0A2K5QMQ9
    Conserved Domains (6) summary
    PHA03247
    Location:9251243
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:350539
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    PRK12323
    Location:564755
    PRK12323; DNA polymerase III subunit gamma/tau
    pfam06741
    Location:405466
    LsmAD; LsmAD domain
    pfam07145
    Location:907921
    PAM2; Ataxin-2 C-terminal region
    pfam14438
    Location:264337
    SM-ATX; Ataxin 2 SM domain