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WASHC4 WASH complex subunit 4 [ Cebus imitator (Panamanian white-faced capuchin) ]

Gene ID: 108312614, updated on 14-Mar-2024

Summary

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Gene symbol
WASHC4
Gene description
WASH complex subunit 4
See related
Ensembl:ENSCCAG00000034148
Gene type
protein coding
RefSeq status
MODEL
Organism
Cebus imitator
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Cebinae; Cebus
Also known as
KIAA1033
Orthologs
human mouse all
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Genomic context

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See WASHC4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
34
Annotation release Status Assembly Chr Location
101 current Cebus_imitator-1.0 (GCF_001604975.1) Unplaced Scaffold NW_016107323.1 (2191353..2251357)

NW_016107323.1Genomic Context describing neighboring genes Neighboring gene NOP protein chaperone 1 Neighboring gene aldehyde dehydrogenase 1 family member L2 Neighboring gene adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 Neighboring gene chromosome unknown C12orf75 homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_016107323 Unplaced Scaffold Reference Cebus_imitator-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endosomal transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endosome organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of WASH complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WASH complex subunit 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cebus imitator Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cebus_imitator-1.0

Genomic

  1. NW_016107323.1 Reference Cebus_imitator-1.0

    Range
    2191353..2251357
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017540600.1 → XP_017396089.1  WASH complex subunit 4 isoform X1

    UniProtKB/TrEMBL
    A0A2K5RWU1
    Related
    ENSCCAP00000032581.1, ENSCCAT00000050340.1

  2. XM_017540606.2 → XP_017396095.1  WASH complex subunit 4 isoform X2

    UniProtKB/TrEMBL
    A0A2K5RWU1
    Conserved Domains (3) summary
    pfam14744
    Location:478 → 822
    WASH-7_mid; WASH complex subunit 7
    pfam14745
    Location:1 → 473
    WASH-7_N; WASH complex subunit 7, N-terminal
    pfam14746
    Location:839 → 1008
    WASH-7_C; WASH complex subunit 7, C-terminal

  3. XM_017540618.2 → XP_017396107.1  WASH complex subunit 4 isoform X4

    UniProtKB/TrEMBL
    A0A2K5RX08
    Related
    ENSCCAP00000032616.1, ENSCCAT00000050374.1
    Conserved Domains (3) summary
    pfam14744
    Location:417 → 761
    WASH-7_mid; WASH complex subunit 7
    pfam14745
    Location:1 → 412
    WASH-7_N; WASH complex subunit 7, N-terminal
    pfam14746
    Location:778 → 947
    WASH-7_C; WASH complex subunit 7, C-terminal

  4. XM_017540613.2 → XP_017396102.1  WASH complex subunit 4 isoform X3

    UniProtKB/TrEMBL
    A0A2K5RX08
    Conserved Domains (3) summary
    pfam14744
    Location:447 → 791
    WASH-7_mid; WASH complex subunit 7
    pfam14745
    Location:1 → 442
    WASH-7_N; WASH complex subunit 7, N-terminal
    pfam14746
    Location:808 → 977
    WASH-7_C; WASH complex subunit 7, C-terminal
Nucleotide Protein
Heading Accession and Version

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