U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CHST11 carbohydrate sulfotransferase 11 [ Cebus imitator (Panamanian white-faced capuchin) ]

Gene ID: 108312541, updated on 14-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
CHST11
Gene description
carbohydrate sulfotransferase 11
See related
Ensembl:ENSCCAG00000024996
Gene type
protein coding
RefSeq status
MODEL
Organism
Cebus imitator
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Cebinae; Cebus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See CHST11 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
101 current Cebus_imitator-1.0 (GCF_001604975.1) Unplaced Scaffold NW_016107323.1 (1501057..1815938)

NW_016107323.1Genomic Context describing neighboring genes Neighboring gene thioredoxin reductase 1 Neighboring gene uncharacterized LOC108312326 Neighboring gene EP300 interacting inhibitor of differentiation 3 Neighboring gene uncharacterized LOC119473034 Neighboring gene uncharacterized LOC108312261 Neighboring gene heterogeneous nuclear ribonucleoproteins C1/C2-like Neighboring gene uncharacterized LOC119473033 Neighboring gene solute carrier family 41 member 2 Neighboring gene 60S ribosomal protein L32-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_016107323 Unplaced Scaffold Reference Cebus_imitator-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
carbohydrate sulfotransferase 11

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Cebus imitator Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cebus_imitator-1.0

Genomic

  1. NW_016107323.1 Reference Cebus_imitator-1.0

    Range
    1501057..1815938
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017540511.2 → XP_017396000.1  carbohydrate sulfotransferase 11 isoform X2

    Conserved Domains (1) summary
    pfam03567
    Location:108 → 338
    Sulfotransfer_2; Sulfotransferase family

  2. XM_017540504.2 → XP_017395993.1  carbohydrate sulfotransferase 11 isoform X1

    UniProtKB/TrEMBL
    A0A2K5QEU1
    Related
    ENSCCAP00000014375.1, ENSCCAT00000031813.1
    Conserved Domains (1) summary
    pfam03567
    Location:113 → 343
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.