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DHX40 DEAH-box helicase 40 [ Cebus imitator (Panamanian white-faced capuchin) ]

Gene ID: 108312032, updated on 14-Mar-2024

Summary

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Gene symbol
DHX40
Gene description
DEAH-box helicase 40
See related
Ensembl:ENSCCAG00000028712
Gene type
protein coding
RefSeq status
MODEL
Organism
Cebus imitator
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Cebinae; Cebus
Orthologs
human mouse all
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Genomic context

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See DHX40 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
101 current Cebus_imitator-1.0 (GCF_001604975.1) Unplaced Scaffold NW_016107436.1 (1479292..1527757)

NW_016107436.1Genomic Context describing neighboring genes Neighboring gene U4 spliceosomal RNA Neighboring gene U4 spliceosomal RNA Neighboring gene cytochrome c oxidase subunit 6A1, mitochondrial-like Neighboring gene clathrin heavy chain Neighboring gene peptidyl-tRNA hydrolase 2 Neighboring gene vacuole membrane protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_016107436 Unplaced Scaffold Reference Cebus_imitator-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular anatomical structure IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable ATP-dependent RNA helicase DHX40

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cebus imitator Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cebus_imitator-1.0

Genomic

  1. NW_016107436.1 Reference Cebus_imitator-1.0

    Range
    1479292..1527757
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037742442.1 → XP_037598370.1  probable ATP-dependent RNA helicase DHX40

    UniProtKB/TrEMBL
    A0A2K5R0X1
    Related
    ENSCCAP00000021786.1, ENSCCAT00000039281.1
    Conserved Domains (1) summary
    COG1643
    Location:10 → 717
    HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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