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CHODL chondrolectin [ Cebus imitator (Panamanian white-faced capuchin) ]

Gene ID: 108311930, updated on 14-Mar-2024

Summary

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Gene symbol
CHODL
Gene description
chondrolectin
See related
Ensembl:ENSCCAG00000029173
Gene type
protein coding
RefSeq status
MODEL
Organism
Cebus imitator
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Cebinae; Cebus
Orthologs
human mouse all
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Genomic context

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See CHODL in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Cebus_imitator-1.0 (GCF_001604975.1) Unplaced Scaffold NW_016107322.1 (3810142..3833223, complement)

NW_016107322.1Genomic Context describing neighboring genes Neighboring gene heat shock protein HSP 90-alpha-like Neighboring gene transmembrane serine protease 15 Neighboring gene chromosome unknown C21orf91 homolog Neighboring gene mortality factor 4-like protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_016107322 Unplaced Scaffold Reference Cebus_imitator-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of axonogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chondrolectin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cebus imitator Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cebus_imitator-1.0

Genomic

  1. NW_016107322.1 Reference Cebus_imitator-1.0

    Range
    3810142..3833223 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017539594.2 → XP_017395083.1  chondrolectin

    UniProtKB/TrEMBL
    A0A2K5R3R2, A0A2K5R3S2
    Related
    ENSCCAP00000022774.1, ENSCCAT00000040274.1
    Conserved Domains (1) summary
    cl02432
    Location:28 → 180
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
Nucleotide Protein
Heading Accession and Version

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