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HSD17B4 hydroxysteroid 17-beta dehydrogenase 4 [ Cebus imitator (Panamanian white-faced capuchin) ]

Gene ID: 108306790, updated on 14-Mar-2024

Summary

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Gene symbol
HSD17B4
Gene description
hydroxysteroid 17-beta dehydrogenase 4
See related
Ensembl:ENSCCAG00000023004
Gene type
protein coding
RefSeq status
MODEL
Organism
Cebus imitator
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Cebinae; Cebus
Orthologs
human mouse all
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Genomic context

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See HSD17B4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
101 current Cebus_imitator-1.0 (GCF_001604975.1) Unplaced Scaffold NW_016107389.1 (3727830..3821415, complement)

NW_016107389.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U13 Neighboring gene fatty acid-binding protein 5-like Neighboring gene TNF alpha induced protein 8 Neighboring gene craniofacial development protein 1-like Neighboring gene Dmx like 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_016107389 Unplaced Scaffold Reference Cebus_imitator-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
peroxisomal multifunctional enzyme type 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cebus imitator Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cebus_imitator-1.0

Genomic

  1. NW_016107389.1 Reference Cebus_imitator-1.0

    Range
    3727830..3821415 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017531867.2 → XP_017387356.1  peroxisomal multifunctional enzyme type 2 isoform X1

    UniProtKB/TrEMBL
    A0A2K5Q3V1
    Related
    ENSCCAP00000010536.1, ENSCCAT00000027932.1

  2. XM_037739734.1 → XP_037595662.1  peroxisomal multifunctional enzyme type 2 isoform X2

    UniProtKB/TrEMBL
    A0A2K5Q3S1
    Related
    ENSCCAP00000010546.1, ENSCCAT00000027942.1
    Conserved Domains (3) summary
    PLN02864
    Location:194 → 468
    PLN02864; enoyl-CoA hydratase
    pfam02036
    Location:491 → 593
    SCP2; SCP-2 sterol transfer family
    cl21454
    Location:1 → 117
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

  3. XM_017531869.2 → XP_017387358.1  peroxisomal multifunctional enzyme type 2 isoform X2

    UniProtKB/TrEMBL
    A0A2K5Q3S1
    Conserved Domains (3) summary
    PLN02864
    Location:194 → 468
    PLN02864; enoyl-CoA hydratase
    pfam02036
    Location:491 → 593
    SCP2; SCP-2 sterol transfer family
    cl21454
    Location:1 → 117
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
Nucleotide Protein
Heading Accession and Version

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