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ASGR2 asialoglycoprotein receptor 2 [ Cebus imitator (Panamanian white-faced capuchin) ]

Gene ID: 108306611, updated on 19-Jun-2024

Summary

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Gene symbol
ASGR2
Gene description
asialoglycoprotein receptor 2
See related
Ensembl:ENSCCAG00000014111
Gene type
protein coding
RefSeq status
MODEL
Organism
Cebus imitator
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Cebinae; Cebus
Orthologs
human mouse all
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Genomic context

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See ASGR2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Cebus_imitator-1.0 (GCF_001604975.1) Unplaced Scaffold NW_016107387.1 (7154513..7167117)

NW_016107387.1Genomic Context describing neighboring genes Neighboring gene proline-rich protein 13-like Neighboring gene uncharacterized LOC108306613 Neighboring gene meiotic nuclear division protein 1 homolog Neighboring gene C-type lectin domain containing 10A Neighboring gene solute carrier family 16 member 11

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_016107387 Unplaced Scaffold Reference Cebus_imitator-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-mannose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fucose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in biological process involved in interspecies interaction between organisms IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
asialoglycoprotein receptor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cebus imitator Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cebus_imitator-1.0

Genomic

  1. NW_016107387.1 Reference Cebus_imitator-1.0

    Range
    7154513..7167117
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017531713.2 → XP_017387202.1  asialoglycoprotein receptor 2 isoform X1

    UniProtKB/TrEMBL
    A0A2K5PFB0
    Related
    ENSCCAP00000002313.1, ENSCCAT00000015206.1

  2. XM_017531716.2 → XP_017387205.1  asialoglycoprotein receptor 2 isoform X2

  3. XM_017531712.2 → XP_017387201.1  asialoglycoprotein receptor 2 isoform X1

    UniProtKB/TrEMBL
    A0A2K5PFB0

  4. XM_017531718.2 → XP_017387207.1  asialoglycoprotein receptor 2 isoform X4

  5. XM_017531710.2 → XP_017387199.1  asialoglycoprotein receptor 2 isoform X1

    UniProtKB/TrEMBL
    A0A2K5PFB0

  6. XM_037739680.1 → XP_037595608.1  asialoglycoprotein receptor 2 isoform X3

    Conserved Domains (2) summary
    cd03590
    Location:166 → 273
    CLECT_DC-SIGN_like; C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)
    pfam03954
    Location:34 → 162
    Lectin_N; Hepatic lectin, N-terminal domain

  7. XM_017531714.2 → XP_017387203.1  asialoglycoprotein receptor 2 isoform X2

Nucleotide Protein
Heading Accession and Version

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