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HS3ST5 heparan sulfate-glucosamine 3-sulfotransferase 5 [ Cebus imitator (Panamanian white-faced capuchin) ]

Gene ID: 108306042, updated on 14-Mar-2024

Summary

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Gene symbol
HS3ST5
Gene description
heparan sulfate-glucosamine 3-sulfotransferase 5
See related
Ensembl:ENSCCAG00000032286
Gene type
protein coding
RefSeq status
MODEL
Organism
Cebus imitator
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Cebinae; Cebus
Orthologs
human mouse all
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Genomic context

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See HS3ST5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Cebus_imitator-1.0 (GCF_001604975.1) Unplaced Scaffold NW_016107384.1 (572609..871045)

NW_016107384.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108306041 Neighboring gene dnaJ homolog subfamily A member 1-like Neighboring gene 40S ribosomal protein SA-like Neighboring gene histone deacetylase 2 Neighboring gene myristoylated alanine rich protein kinase C substrate

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_016107384 Unplaced Scaffold Reference Cebus_imitator-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cebus imitator Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cebus_imitator-1.0

Genomic

  1. NW_016107384.1 Reference Cebus_imitator-1.0

    Range
    572609..871045
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017530800.2 → XP_017386289.1  heparan sulfate glucosamine 3-O-sulfotransferase 5

    UniProtKB/TrEMBL
    A0A2K5RKD8
    Conserved Domains (1) summary
    pfam00685
    Location:90 → 330
    Sulfotransfer_1; Sulfotransferase domain

  2. XM_037739357.1 → XP_037595285.1  heparan sulfate glucosamine 3-O-sulfotransferase 5

    UniProtKB/TrEMBL
    A0A2K5RKD8
    Conserved Domains (1) summary
    pfam00685
    Location:90 → 330
    Sulfotransfer_1; Sulfotransferase domain

  3. XM_037739358.1 → XP_037595286.1  heparan sulfate glucosamine 3-O-sulfotransferase 5

    UniProtKB/TrEMBL
    A0A2K5RKD8
    Related
    ENSCCAP00000028602.1, ENSCCAT00000046280.1
    Conserved Domains (1) summary
    pfam00685
    Location:90 → 330
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
Heading Accession and Version

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