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COLEC10 collectin subfamily member 10 [ Cebus imitator (Panamanian white-faced capuchin) ]

Gene ID: 108305924, updated on 14-Mar-2024

Summary

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Gene symbol
COLEC10
Gene description
collectin subfamily member 10
See related
Ensembl:ENSCCAG00000024940
Gene type
protein coding
RefSeq status
MODEL
Organism
Cebus imitator
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Cebinae; Cebus
Orthologs
human mouse all
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Genomic context

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See COLEC10 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Cebus_imitator-1.0 (GCF_001604975.1) Unplaced Scaffold NW_016107383.1 (5150325..5191658)

NW_016107383.1Genomic Context describing neighboring genes Neighboring gene sterile alpha motif domain containing 12 Neighboring gene uncharacterized LOC119471639 Neighboring gene uncharacterized LOC119471640 Neighboring gene TNF receptor superfamily member 11b Neighboring gene uncharacterized LOC119471641 Neighboring gene mal, T cell differentiation protein 2 Neighboring gene small nucleolar RNA SNORA32

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_016107383 Unplaced Scaffold Reference Cebus_imitator-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
collectin-10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cebus imitator Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cebus_imitator-1.0

Genomic

  1. NW_016107383.1 Reference Cebus_imitator-1.0

    Range
    5150325..5191658
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017530690.2 → XP_017386179.1  collectin-10 isoform X1

    UniProtKB/TrEMBL
    A0A2K5QEF8
    Related
    ENSCCAP00000014259.1, ENSCCAT00000031697.1
    Conserved Domains (2) summary
    cd03591
    Location:157 → 272
    CLECT_collectin_like; C-type lectin-like domain (CTLD) of the type found in human collectins including lung surfactant proteins A and D, mannose- or mannan binding lectin (MBL), and CL-L1 (collectin liver 1)
    pfam01391
    Location:46 → 93
    Collagen; Collagen triple helix repeat (20 copies)

  2. XM_017530691.2 → XP_017386180.1  collectin-10 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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