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DERA deoxyribose-phosphate aldolase [ Cebus imitator (Panamanian white-faced capuchin) ]

Gene ID: 108304481, updated on 14-Mar-2024

Summary

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Gene symbol
DERA
Gene description
deoxyribose-phosphate aldolase
See related
Ensembl:ENSCCAG00000022938
Gene type
protein coding
RefSeq status
MODEL
Organism
Cebus imitator
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Cebinae; Cebus
Orthologs
human mouse all
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Genomic context

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See DERA in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current Cebus_imitator-1.0 (GCF_001604975.1) Unplaced Scaffold NW_016107317.1 (3891197..4016503)

NW_016107317.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119471227 Neighboring gene uncharacterized LOC108304477 Neighboring gene serine/threonine kinase receptor associated protein Neighboring gene prolyl hydroxylase EGLN3-like Neighboring gene U6 spliceosomal RNA Neighboring gene solute carrier family 15 member 5 Neighboring gene uncharacterized LOC119471228

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_016107317 Unplaced Scaffold Reference Cebus_imitator-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables deoxyribose-phosphate aldolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in deoxyribonucleotide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
deoxyribose-phosphate aldolase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cebus imitator Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cebus_imitator-1.0

Genomic

  1. NW_016107317.1 Reference Cebus_imitator-1.0

    Range
    3891197..4016503
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017528713.2 → XP_017384202.1  deoxyribose-phosphate aldolase isoform X1

    UniProtKB/TrEMBL
    A0A2K5Q3H9, A0A2K5Q3J2
    Related
    ENSCCAP00000010438.1, ENSCCAT00000027832.1

  2. XM_037738420.1 → XP_037594348.1  deoxyribose-phosphate aldolase isoform X3

    UniProtKB/TrEMBL
    A0A2K5Q3J2
    Conserved Domains (1) summary
    cd00959
    Location:50 → 259
    DeoC; 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family

  3. XM_037738415.1 → XP_037594343.1  deoxyribose-phosphate aldolase isoform X2

    UniProtKB/TrEMBL
    A0A2K5Q3I7
    Conserved Domains (1) summary
    cd00959
    Location:48 → 275
    DeoC; 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family
Nucleotide Protein
Heading Accession and Version

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