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LPIN1 lipin 1 [ Cebus imitator (Panamanian white-faced capuchin) ]

Gene ID: 108302324, updated on 14-Mar-2024

Summary

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Gene symbol
LPIN1
Gene description
lipin 1
See related
Ensembl:ENSCCAG00000030095
Gene type
protein coding
RefSeq status
MODEL
Organism
Cebus imitator
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Cebinae; Cebus
Orthologs
human mouse all
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Genomic context

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See LPIN1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
25
Annotation release Status Assembly Chr Location
101 current Cebus_imitator-1.0 (GCF_001604975.1) Unplaced Scaffold NW_016107316.1 (3455335..3607978)

NW_016107316.1Genomic Context describing neighboring genes Neighboring gene growth regulating estrogen receptor binding 1 Neighboring gene uncharacterized LOC108302304 Neighboring gene neurotensin receptor 2 Neighboring gene small nucleolar RNA SNORD18 Neighboring gene cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_016107316 Unplaced Scaffold Reference Cebus_imitator-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to insulin stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triglyceride biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial outer membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidate phosphatase LPIN1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cebus imitator Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cebus_imitator-1.0

Genomic

  1. NW_016107316.1 Reference Cebus_imitator-1.0

    Range
    3455335..3607978
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037737390.1 → XP_037593318.1  phosphatidate phosphatase LPIN1 isoform X7

    UniProtKB/TrEMBL
    A0A2K5R9W3
    Related
    ENSCCAP00000024918.1, ENSCCAT00000042436.1
    Conserved Domains (3) summary
    pfam04571
    Location:50 → 156
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:736 → 912
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:548 → 665
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain

  2. XM_037737378.1 → XP_037593306.1  phosphatidate phosphatase LPIN1 isoform X1

    UniProtKB/TrEMBL
    A0A2K5R9W3
    Conserved Domains (3) summary
    pfam04571
    Location:50 → 156
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:736 → 961
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:548 → 665
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain

  3. XM_037737380.1 → XP_037593308.1  phosphatidate phosphatase LPIN1 isoform X2

    UniProtKB/TrEMBL
    A0A2K5R9W3
    Conserved Domains (3) summary
    pfam04571
    Location:50 → 156
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:735 → 960
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:547 → 664
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain

  4. XM_017525942.2 → XP_017381431.1  phosphatidate phosphatase LPIN1 isoform X4

    UniProtKB/TrEMBL
    A0A2K5R9W2, A0A2K5R9W3
    Related
    ENSCCAP00000024910.1, ENSCCAT00000042427.1

  5. XM_037737397.1 → XP_037593325.1  phosphatidate phosphatase LPIN1 isoform X10

    UniProtKB/TrEMBL
    A0A2K5R9W3
    Conserved Domains (3) summary
    pfam04571
    Location:50 → 156
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:709 → 934
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:547 → 638
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain

  6. XM_037737389.1 → XP_037593317.1  phosphatidate phosphatase LPIN1 isoform X5

    UniProtKB/TrEMBL
    A0A2K5R9X5
    Conserved Domains (3) summary
    pfam04571
    Location:50 → 156
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:700 → 925
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:512 → 629
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain

  7. XM_017525953.2 → XP_017381442.1  phosphatidate phosphatase LPIN1 isoform X9

    UniProtKB/TrEMBL
    A0A2K5R9X5

  8. XM_037737383.1 → XP_037593311.1  phosphatidate phosphatase LPIN1 isoform X3

    UniProtKB/TrEMBL
    A0A2K5R9W3
    Conserved Domains (3) summary
    pfam04571
    Location:41 → 147
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:727 → 952
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:539 → 656
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain

  9. XM_017525947.2 → XP_017381436.1  phosphatidate phosphatase LPIN1 isoform X6

    UniProtKB/TrEMBL
    A0A2K5R9W3

  10. XM_017525951.2 → XP_017381440.1  phosphatidate phosphatase LPIN1 isoform X8

    UniProtKB/TrEMBL
    A0A2K5R9X5
    Related
    ENSCCAP00000024940.1, ENSCCAT00000042458.1
Nucleotide Protein
Heading Accession and Version

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