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LOC108297313 polypeptide N-acetylgalactosaminyltransferase like 5 [ Cebus imitator (Panamanian white-faced capuchin) ]

Gene ID: 108297313, updated on 28-Dec-2023

Summary

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Gene symbol
LOC108297313
Gene description
polypeptide N-acetylgalactosaminyltransferase like 5
See related
Ensembl:ENSCCAG00000030227
Gene type
protein coding
RefSeq status
MODEL
Organism
Cebus imitator
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Cebinae; Cebus
Also known as
GALNTL5
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Genomic context

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See LOC108297313 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current Cebus_imitator-1.0 (GCF_001604975.1) Unplaced Scaffold NW_016107335.1 (6980358..7052888, complement)

NW_016107335.1Genomic Context describing neighboring genes Neighboring gene lysine methyltransferase 2C Neighboring gene polypeptide N-acetylgalactosaminyltransferase 11 Neighboring gene polypeptide N-acetylgalactosaminyltransferase 11-like Neighboring gene U6 spliceosomal RNA Neighboring gene protein kinase AMP-activated non-catalytic subunit gamma 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_016107335 Unplaced Scaffold Reference Cebus_imitator-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in spermatid development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
inactive polypeptide N-acetylgalactosaminyltransferase-like protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cebus imitator Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cebus_imitator-1.0

Genomic

  1. NW_016107335.1 Reference Cebus_imitator-1.0

    Range
    6980358..7052888 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037735501.1 → XP_037591429.1  inactive polypeptide N-acetylgalactosaminyltransferase-like protein 5 isoform X2

    Conserved Domains (1) summary
    cl11394
    Location:136 → 348
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  2. XM_037735495.1 → XP_037591423.1  inactive polypeptide N-acetylgalactosaminyltransferase-like protein 5 isoform X2

    Conserved Domains (1) summary
    cl11394
    Location:136 → 348
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  3. XM_017520025.2 → XP_017375514.2  inactive polypeptide N-acetylgalactosaminyltransferase-like protein 5 isoform X1

    UniProtKB/TrEMBL
    A0A2K5R9P7
    Related
    ENSCCAP00000024846.1, ENSCCAT00000042362.1
    Conserved Domains (1) summary
    cd02510
    Location:137 → 433
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
Nucleotide Protein
Heading Accession and Version

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