U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

GBGT1 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group) [ Cebus imitator (Panamanian white-faced capuchin) ]

Gene ID: 108295417, updated on 14-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
GBGT1
Gene description
globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group)
See related
Ensembl:ENSCCAG00000025118
Gene type
protein coding
RefSeq status
MODEL
Organism
Cebus imitator
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Cebinae; Cebus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See GBGT1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Cebus_imitator-1.0 (GCF_001604975.1) Unplaced Scaffold NW_016107953.1 (743291..754271, complement)

NW_016107953.1Genomic Context describing neighboring genes Neighboring gene bile salt-activated lipase-like Neighboring gene small nucleolar RNA U13 Neighboring gene ral guanine nucleotide dissociation stimulator Neighboring gene odorant-binding protein 2a Neighboring gene uncharacterized LOC119469376 Neighboring gene lipocalin-1-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_016107953 Unplaced Scaffold Reference Cebus_imitator-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables globoside alpha-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
globoside alpha-1,3-N-acetylgalactosaminyltransferase 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Cebus imitator Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cebus_imitator-1.0

Genomic

  1. NW_016107953.1 Reference Cebus_imitator-1.0

    Range
    743291..754271 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017517579.2 → XP_017373068.1  globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A2K5QFI6
    Related
    ENSCCAP00000014652.1, ENSCCAT00000032093.1

  2. XM_017517581.2 → XP_017373070.1  globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 isoform X3

    Conserved Domains (1) summary
    cl11394
    Location:1 → 211
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  3. XM_017517583.2 → XP_017373072.1  globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 isoform X3

    Conserved Domains (1) summary
    cl11394
    Location:1 → 211
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  4. XM_017517580.2 → XP_017373069.1  globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A2K5QFI6

  5. XM_037734584.1 → XP_037590512.1  globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 isoform X3

    Conserved Domains (1) summary
    cl11394
    Location:1 → 211
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  6. XM_037734585.1 → XP_037590513.1  globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 isoform X3

    Conserved Domains (1) summary
    cl11394
    Location:1 → 211
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.