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CHPT1 choline phosphotransferase 1 [ Cebus imitator (Panamanian white-faced capuchin) ]

Gene ID: 108294685, updated on 14-Mar-2024

Summary

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Gene symbol
CHPT1
Gene description
choline phosphotransferase 1
See related
Ensembl:ENSCCAG00000021551
Gene type
protein coding
RefSeq status
MODEL
Organism
Cebus imitator
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Cebinae; Cebus
Orthologs
human mouse all
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Genomic context

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See CHPT1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Cebus_imitator-1.0 (GCF_001604975.1) Unplaced Scaffold NW_016107333.1 (19249476..19280901)

NW_016107333.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119469190 Neighboring gene myosin binding protein C1 Neighboring gene uncharacterized LOC119469189 Neighboring gene uncharacterized LOC119469188 Neighboring gene synaptonemal complex protein 3 Neighboring gene U6 spliceosomal RNA Neighboring gene N-acetylglucosamine-1-phosphate transferase subunits alpha and beta Neighboring gene small nucleolar RNA U13

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_016107333 Unplaced Scaffold Reference Cebus_imitator-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables diacylglycerol cholinephosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ethanolaminephosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylethanolamine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cholinephosphotransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cebus imitator Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cebus_imitator-1.0

Genomic

  1. NW_016107333.1 Reference Cebus_imitator-1.0

    Range
    19249476..19280901
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017516618.2 → XP_017372107.1  cholinephosphotransferase 1 isoform X2

    Conserved Domains (1) summary
    cl00453
    Location:25 → 213
    CDP-OH_P_transf; CDP-alcohol phosphatidyltransferase

  2. XM_017516611.2 → XP_017372100.1  cholinephosphotransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A2K5PVI5
    Related
    ENSCCAP00000007596.1, ENSCCAT00000024972.1
    Conserved Domains (1) summary
    cl00453
    Location:25 → 337
    CDP-OH_P_transf; CDP-alcohol phosphatidyltransferase

RNA

  1. XR_001821134.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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