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SDHC succinate dehydrogenase complex subunit C [ Cebus imitator (Panamanian white-faced capuchin) ]

Gene ID: 108293638, updated on 26-Jun-2024

Summary

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Gene symbol
SDHC
Gene description
succinate dehydrogenase complex subunit C
See related
Ensembl:ENSCCAG00000024766
Gene type
protein coding
RefSeq status
MODEL
Organism
Cebus imitator
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Cebinae; Cebus
Orthologs
human mouse all
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Genomic context

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See SDHC in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Cebus_imitator-1.0 (GCF_001604975.1) Unplaced Scaffold NW_016107856.1 (476558..529758)

NW_016107856.1Genomic Context describing neighboring genes Neighboring gene Purkinje cell protein 4 like 1 Neighboring gene myelin protein zero Neighboring gene cilia and flagella associated protein 126 Neighboring gene transfer RNA valine (anticodon CAC)

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_016107856 Unplaced Scaffold Reference Cebus_imitator-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables electron transfer activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables succinate dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial electron transport, succinate to ubiquinone IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
succinate dehydrogenase cytochrome b560 subunit, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cebus imitator Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cebus_imitator-1.0

Genomic

  1. NW_016107856.1 Reference Cebus_imitator-1.0

    Range
    476558..529758
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017515146.2 → XP_017370635.1  succinate dehydrogenase cytochrome b560 subunit, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A2K5QDF6, A0A2K5QDH7
    Related
    ENSCCAP00000013910.1, ENSCCAT00000031346.1
    Conserved Domains (1) summary
    cd03499
    Location:50 → 152
    SQR_TypeC_SdhC; Succinate:quinone oxidoreductase (SQR) Type C subfamily, Succinate dehydrogenase C (SdhC) subunit; composed of bacterial SdhC and eukaryotic large cytochrome b binding (CybL) proteins. SQR catalyzes the oxidation of succinate to fumarate coupled to the ...

  2. XM_017515147.2 → XP_017370636.1  succinate dehydrogenase cytochrome b560 subunit, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A2K5QDE2, A0A2K5RET9
    Related
    ENSCCAP00000013913.1, ENSCCAT00000031349.1
    Conserved Domains (1) summary
    cd03499
    Location:50 → 79
    SQR_TypeC_SdhC; Succinate:quinone oxidoreductase (SQR) Type C subfamily, Succinate dehydrogenase C (SdhC) subunit; composed of bacterial SdhC and eukaryotic large cytochrome b binding (CybL) proteins. SQR catalyzes the oxidation of succinate to fumarate coupled to the ...
Nucleotide Protein
Heading Accession and Version

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