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GRIFIN galectin-related inter-fiber protein [ Cebus imitator (Panamanian white-faced capuchin) ]

Gene ID: 108293022, updated on 14-Mar-2024

Summary

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Gene symbol
GRIFIN
Gene description
galectin-related inter-fiber protein
See related
Ensembl:ENSCCAG00000036538
Gene type
protein coding
RefSeq status
MODEL
Organism
Cebus imitator
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Cebinae; Cebus
Orthologs
human mouse all
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Genomic context

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See GRIFIN in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Cebus_imitator-1.0 (GCF_001604975.1) Unplaced Scaffold NW_016107834.1 (1112324..1114452)

NW_016107834.1Genomic Context describing neighboring genes Neighboring gene tweety family member 3 Neighboring gene LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase Neighboring gene uncharacterized LOC108293015 Neighboring gene carbohydrate sulfotransferase 12

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_016107834 Unplaced Scaffold Reference Cebus_imitator-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
grifin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cebus imitator Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cebus_imitator-1.0

Genomic

  1. NW_016107834.1 Reference Cebus_imitator-1.0

    Range
    1112324..1114452
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037733357.1 → XP_037589285.1  grifin isoform X4

    Conserved Domains (1) summary
    cl00071
    Location:147 → 194
    GLECT; Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may ...

  2. XM_017514198.2 → XP_017369687.2  grifin isoform X3

    Conserved Domains (1) summary
    smart00908
    Location:11 → 116
    Gal-bind_lectin; Galactoside-binding lectin

  3. XM_017514197.2 → XP_017369686.2  grifin isoform X2

    Conserved Domains (1) summary
    smart00908
    Location:11 → 131
    Gal-bind_lectin; Galactoside-binding lectin

  4. XM_017514196.2 → XP_017369685.2  grifin isoform X1

    UniProtKB/TrEMBL
    A0A2K5SAD7
    Related
    ENSCCAP00000037342.1, ENSCCAT00000055133.1
    Conserved Domains (1) summary
    smart00908
    Location:11 → 131
    Gal-bind_lectin; Galactoside-binding lectin
Nucleotide Protein
Heading Accession and Version

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