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GPC1 glypican 1 [ Cebus imitator (Panamanian white-faced capuchin) ]

Gene ID: 108290795, updated on 14-Mar-2024

Summary

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Gene symbol
GPC1
Gene description
glypican 1
See related
Ensembl:ENSCCAG00000035734
Gene type
protein coding
RefSeq status
MODEL
Organism
Cebus imitator
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Cebinae; Cebus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current Cebus_imitator-1.0 (GCF_001604975.1) Unplaced Scaffold NW_016107758.1 (1510052..1544243, complement)

NW_016107758.1Genomic Context describing neighboring genes Neighboring gene arginyl aminopeptidase like 1 Neighboring gene ankyrin repeat and MYND domain containing 1 Neighboring gene dual specificity phosphatase 28 Neighboring gene uncharacterized LOC108290796 Neighboring gene small nucleolar RNA U3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_016107758 Unplaced Scaffold Reference Cebus_imitator-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fibroblast growth factor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of fibroblast growth factor receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of protein localization to membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glypican-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cebus imitator Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cebus_imitator-1.0

Genomic

  1. NW_016107758.1 Reference Cebus_imitator-1.0

    Range
    1510052..1544243 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017510763.2 → XP_017366252.1  glypican-1 isoform X1

    UniProtKB/TrEMBL
    A0A2K5S5E6
    Related
    ENSCCAP00000035617.1, ENSCCAT00000053397.1

  2. XM_037732182.1 → XP_037588110.1  glypican-1 isoform X2

    Conserved Domains (1) summary
    pfam01153
    Location:1 → 468
    Glypican
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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