U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

XYLB xylulokinase [ Cebus imitator (Panamanian white-faced capuchin) ]

Gene ID: 108289103, updated on 11-Apr-2024

Summary

Go to the top of the page Help
Gene symbol
XYLB
Gene description
xylulokinase
See related
Ensembl:ENSCCAG00000022508
Gene type
protein coding
RefSeq status
MODEL
Organism
Cebus imitator
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Cebinae; Cebus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See XYLB in Genome Data Viewer
Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
101 current Cebus_imitator-1.0 (GCF_001604975.1) Unplaced Scaffold NW_016107706.1 (1763123..1823493, complement)

NW_016107706.1Genomic Context describing neighboring genes Neighboring gene activin A receptor type 2B Neighboring gene 40S ribosomal protein S4, Y-like Neighboring gene solute carrier family 22 member 14 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_016107706 Unplaced Scaffold Reference Cebus_imitator-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-xylulokinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in D-xylose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in xylulose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
xylulose kinase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Cebus imitator Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cebus_imitator-1.0

Genomic

  1. NW_016107706.1 Reference Cebus_imitator-1.0

    Range
    1763123..1823493 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017508390.2 → XP_017363879.1  xylulose kinase isoform X3

    UniProtKB/TrEMBL
    A0A2K5Q113, A0A2K5Q119
    Related
    ENSCCAP00000009579.1, ENSCCAT00000026963.1

  2. XM_037731317.1 → XP_037587245.1  xylulose kinase isoform X2

    UniProtKB/TrEMBL
    A0A2K5Q119
    Conserved Domains (1) summary
    cd07776
    Location:25 → 480
    FGGY_D-XK_euk; eukaryotic D-xylulose kinases; a subfamily of the FGGY family of carbohydrate kinases

  3. XM_037731316.1 → XP_037587244.1  xylulose kinase isoform X1

    UniProtKB/TrEMBL
    A0A2K5Q119
    Conserved Domains (1) summary
    cd07776
    Location:25 → 489
    FGGY_D-XK_euk; eukaryotic D-xylulose kinases; a subfamily of the FGGY family of carbohydrate kinases

  4. XM_037731318.1 → XP_037587246.1  xylulose kinase isoform X4

    Conserved Domains (1) summary
    cd07776
    Location:25 → 460
    FGGY_D-XK_euk; eukaryotic D-xylulose kinases; a subfamily of the FGGY family of carbohydrate kinases

RNA

  1. XR_005196839.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.