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ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 [ Cebus imitator (Panamanian white-faced capuchin) ]

Gene ID: 108287780, updated on 14-Mar-2024

Summary

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Gene symbol
ST3GAL6
Gene description
ST3 beta-galactoside alpha-2,3-sialyltransferase 6
See related
Ensembl:ENSCCAG00000033953
Gene type
protein coding
RefSeq status
MODEL
Organism
Cebus imitator
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Cebinae; Cebus
Orthologs
human mouse all
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Genomic context

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See ST3GAL6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
101 current Cebus_imitator-1.0 (GCF_001604975.1) Unplaced Scaffold NW_016107669.1 (392403..456257)

NW_016107669.1Genomic Context describing neighboring genes Neighboring gene voltage-dependent anion-selective channel protein 1-like Neighboring gene 60S ribosomal protein L22-like Neighboring gene translation initiation factor IF-2-like Neighboring gene discoidin, CUB and LCCL domain containing 2 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_016107669 Unplaced Scaffold Reference Cebus_imitator-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-galactoside alpha-2,3-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
type 2 lactosamine alpha-2,3-sialyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cebus imitator Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cebus_imitator-1.0

Genomic

  1. NW_016107669.1 Reference Cebus_imitator-1.0

    Range
    392403..456257
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037730601.1 → XP_037586529.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A2K5RUN3, A0A2K5RUR3
    Conserved Domains (1) summary
    pfam00777
    Location:85 → 329
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_037730599.1 → XP_037586527.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X4

    UniProtKB/TrEMBL
    A0A2K5RUR4
    Related
    ENSCCAP00000031883.1, ENSCCAT00000049637.1
    Conserved Domains (1) summary
    pfam00777
    Location:1 → 243
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  3. XM_017506364.2 → XP_017361853.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A2K5RUN3, A0A2K5RUR3
    Conserved Domains (1) summary
    pfam00777
    Location:85 → 329
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  4. XM_037730600.1 → XP_037586528.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A2K5RUN3, A0A2K5RUR3
    Related
    ENSCCAP00000031840.1, ENSCCAT00000049594.1
    Conserved Domains (1) summary
    pfam00777
    Location:85 → 329
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  5. XM_017506360.2 → XP_017361849.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A2K5RUN3, A0A2K5RUR3
    Conserved Domains (1) summary
    pfam00777
    Location:85 → 329
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  6. XM_017506359.2 → XP_017361848.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A2K5RUN3, A0A2K5RUR3
    Conserved Domains (1) summary
    pfam00777
    Location:85 → 329
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  7. XM_037730595.1 → XP_037586523.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A2K5RUN3
    Conserved Domains (1) summary
    pfam00777
    Location:105 → 349
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  8. XM_037730596.1 → XP_037586524.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A2K5RUN3, A0A2K5RUR3
    Conserved Domains (1) summary
    pfam00777
    Location:85 → 329
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  9. XM_037730594.1 → XP_037586522.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A2K5RUN3, A0A2K5RUR3
    Conserved Domains (1) summary
    pfam00777
    Location:85 → 329
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  10. XM_037730593.1 → XP_037586521.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A2K5RUN3, A0A2K5RUR3
    Related
    ENSCCAP00000031865.1, ENSCCAT00000049619.1
    Conserved Domains (1) summary
    pfam00777
    Location:85 → 329
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  11. XM_037730597.1 → XP_037586525.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X3

    Conserved Domains (1) summary
    pfam00777
    Location:50 → 294
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  12. XM_037730598.1 → XP_037586526.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X3

    Conserved Domains (1) summary
    pfam00777
    Location:50 → 294
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  13. XM_037730602.1 → XP_037586530.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X5

    UniProtKB/TrEMBL
    A0A2K5RUR4
    Conserved Domains (1) summary
    pfam00777
    Location:1 → 185
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
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