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MTM1 myotubularin 1 [ Cebus imitator (Panamanian white-faced capuchin) ]

Gene ID: 108284236, updated on 14-Mar-2024

Summary

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Gene symbol
MTM1
Gene description
myotubularin 1
See related
Ensembl:ENSCCAG00000025641
Gene type
protein coding
RefSeq status
MODEL
Organism
Cebus imitator
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Cebinae; Cebus
Orthologs
human mouse all
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Genomic context

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See MTM1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
101 current Cebus_imitator-1.0 (GCF_001604975.1) Unplaced Scaffold NW_016107588.1 (775915..895745)

NW_016107588.1Genomic Context describing neighboring genes Neighboring gene mastermind like domain containing 1 Neighboring gene endothelium and lymphocyte associated ASCH domain 2 Neighboring gene gamma-aminobutyric acid receptor-associated protein-like Neighboring gene myotubularin related protein 1 Neighboring gene small nucleolar RNA U3 Neighboring gene CD99 molecule like 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_016107588 Unplaced Scaffold Reference Cebus_imitator-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrion distribution IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in muscle cell cellular homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myotubularin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cebus imitator Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cebus_imitator-1.0

Genomic

  1. NW_016107588.1 Reference Cebus_imitator-1.0

    Range
    775915..895745
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017500908.2 → XP_017356397.1  myotubularin

    UniProtKB/TrEMBL
    A0A2K5QIK8
    Related
    ENSCCAP00000015733.1, ENSCCAT00000033180.1
Nucleotide Protein
Heading Accession and Version

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