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TMED1 transmembrane p24 trafficking protein 1 [ Cebus imitator (Panamanian white-faced capuchin) ]

Gene ID: 108283574, updated on 14-Mar-2024

Summary

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Gene symbol
TMED1
Gene description
transmembrane p24 trafficking protein 1
See related
Ensembl:ENSCCAG00000029691
Gene type
protein coding
RefSeq status
MODEL
Organism
Cebus imitator
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Cebinae; Cebus
Orthologs
human mouse all
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Genomic context

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See TMED1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Cebus_imitator-1.0 (GCF_001604975.1) Unplaced Scaffold NW_016107578.1 (33539..37787)

NW_016107578.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 1-like Neighboring gene chromosome unknown C19orf38 homolog Neighboring gene dynamin 2 Neighboring gene queuine tRNA-ribosyltransferase catalytic subunit 1 Neighboring gene interleukin enhancer binding factor 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_016107578 Unplaced Scaffold Reference Cebus_imitator-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane emp24 domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cebus imitator Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cebus_imitator-1.0

Genomic

  1. NW_016107578.1 Reference Cebus_imitator-1.0

    Range
    33539..37787
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017499954.2 → XP_017355443.1  transmembrane emp24 domain-containing protein 1 isoform X3

    Conserved Domains (1) summary
    pfam01105
    Location:33 → 161
    EMP24_GP25L; emp24/gp25L/p24 family/GOLD

  2. XM_017499952.2 → XP_017355441.1  transmembrane emp24 domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A2K5R6R9
    Related
    ENSCCAP00000023805.1, ENSCCAT00000041313.1
    Conserved Domains (1) summary
    pfam01105
    Location:33 → 220
    EMP24_GP25L; emp24/gp25L/p24 family/GOLD

  3. XM_017499953.2 → XP_017355442.1  transmembrane emp24 domain-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A2K5R6P0
    Related
    ENSCCAP00000023812.1, ENSCCAT00000041320.1
    Conserved Domains (1) summary
    pfam01105
    Location:24 → 184
    EMP24_GP25L; emp24/gp25L/p24 family/GOLD
Nucleotide Protein
Heading Accession and Version

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