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HS2ST1 heparan sulfate 2-O-sulfotransferase 1 [ Cebus imitator (Panamanian white-faced capuchin) ]

Gene ID: 108283510, updated on 14-Mar-2024

Summary

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Gene symbol
HS2ST1
Gene description
heparan sulfate 2-O-sulfotransferase 1
See related
Ensembl:ENSCCAG00000026104
Gene type
protein coding
RefSeq status
MODEL
Organism
Cebus imitator
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Cebinae; Cebus
Orthologs
human mouse all
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Genomic context

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See HS2ST1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
101 current Cebus_imitator-1.0 (GCF_001604975.1) Unplaced Scaffold NW_016107576.1 (3361379..3550660)

NW_016107576.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA47 Neighboring gene uncharacterized LOC108283508 Neighboring gene selenoprotein F Neighboring gene ras suppressor protein 1-like Neighboring gene uncharacterized LOC119467129 Neighboring gene uncharacterized LOC108283513 Neighboring gene zinc finger protein 507 Neighboring gene uncharacterized LOC108283517

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_016107576 Unplaced Scaffold Reference Cebus_imitator-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparan sulfate 2-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, enzymatic modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate 2-O-sulfotransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cebus imitator Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cebus_imitator-1.0

Genomic

  1. NW_016107576.1 Reference Cebus_imitator-1.0

    Range
    3361379..3550660
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017499873.2 → XP_017355362.1  heparan sulfate 2-O-sulfotransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A2K5QLB5
    Related
    ENSCCAP00000016635.1, ENSCCAT00000034087.1
    Conserved Domains (1) summary
    pfam03567
    Location:71 → 326
    Sulfotransfer_2; Sulfotransferase family

  2. XM_017499872.2 → XP_017355361.1  heparan sulfate 2-O-sulfotransferase 1 isoform X1

    Conserved Domains (1) summary
    pfam03567
    Location:71 → 327
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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